Institute for Biotechnology

Research

Flux Balance Analysis

Constraints-based modeling for non-model organisms.

Flux balance analysis (FBA) uses linear programming to calculate the flow of metabolites through a metabolic network. We specialize in developing FBA models for organisms outside the traditional E. coli and S. cerevisiae paradigms.

Theoretical Framework

The transition from academic postulation to industrial reality requires a stringent quantitative framework. In addressing this vector, we apply our standard methodology to isolate the exact variables that lead to non-linear yield drop-offs at scale.

Key Variables

  • Mass transfer coefficients (kLa)
  • Thermodynamic limitations of the proposed pathway
  • Cellular burden and plasmid maintenance costs

Institute Data

Based on our 2024 analysis of 140 failed biomanufacturing scale-ups, 68% were due to physical constraints (mixing/cooling) rather than biological failure.

Interactive Assessment Tool

Use the tool below to run a preliminary calculation based on our simplified models. Note that this is for heuristic purposes only.

Growth Rate Estimator

Estimates specific growth rate (mu) based on glucose uptake.

Result